Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.82■□□□□ 0.76
TCRBV4S1A1TA0A5B7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBV4S1A1TA0A5B7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TCRBV4S1A1TA0A5B7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.81■□□□□ 0.76
TCRBV4S1A1TA0A5B7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV4S1A1TA0A5B7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV4S1A1TA0A5B7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV4S1A1TA0A5B7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV4S1A1TA0A5B7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV4S1A1TA0A5B7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV4S1A1TA0A5B7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV4S1A1TA0A5B7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV4S1A1TA0A5B7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV4S1A1TA0A5B7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV4S1A1TA0A5B7 RARRES2P2-201ENST00000394842 485 ntBASIC19.8■□□□□ 0.76
TCRBV4S1A1TA0A5B7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV4S1A1TA0A5B7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TCRBV4S1A1TA0A5B7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV4S1A1TA0A5B7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TCRBV4S1A1TA0A5B7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV4S1A1TA0A5B7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV4S1A1TA0A5B7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV4S1A1TA0A5B7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.79■□□□□ 0.76
TCRBV4S1A1TA0A5B7 RNF126P1-201ENST00000567452 1320 ntBASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV4S1A1TA0A5B7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TCRBV4S1A1TA0A5B7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.77■□□□□ 0.76
TCRBV4S1A1TA0A5B7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TCRBV4S1A1TA0A5B7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.77■□□□□ 0.75
TCRBV4S1A1TA0A5B7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TCRBV4S1A1TA0A5B7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TCRBV4S1A1TA0A5B7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV4S1A1TA0A5B7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV4S1A1TA0A5B7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBV4S1A1TA0A5B7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TCRBV4S1A1TA0A5B7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBV4S1A1TA0A5B7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV4S1A1TA0A5B7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV4S1A1TA0A5B7 AC148477.6-201ENST00000623746 465 ntBASIC19.75■□□□□ 0.75
TCRBV4S1A1TA0A5B7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV4S1A1TA0A5B7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBV4S1A1TA0A5B7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBV4S1A1TA0A5B7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBV4S1A1TA0A5B7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TCRBV4S1A1TA0A5B7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.73■□□□□ 0.75
TCRBV4S1A1TA0A5B7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRBV4S1A1TA0A5B7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.73■□□□□ 0.75
TCRBV4S1A1TA0A5B7 AC018358.1-201ENST00000631079 1402 ntBASIC19.73■□□□□ 0.75
TCRBV4S1A1TA0A5B7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV4S1A1TA0A5B7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRBV4S1A1TA0A5B7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TCRBV4S1A1TA0A5B7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV4S1A1TA0A5B7 MIR219A2-201ENST00000608502 1504 ntBASIC19.71■□□□□ 0.75
TCRBV4S1A1TA0A5B7 ABHD17AP5-201ENST00000580133 923 ntBASIC19.71■□□□□ 0.75
TCRBV4S1A1TA0A5B7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV4S1A1TA0A5B7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TCRBV4S1A1TA0A5B7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV4S1A1TA0A5B7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV4S1A1TA0A5B7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV4S1A1TA0A5B7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV4S1A1TA0A5B7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBV4S1A1TA0A5B7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TCRBV4S1A1TA0A5B7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TCRBV4S1A1TA0A5B7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TCRBV4S1A1TA0A5B7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV4S1A1TA0A5B7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TCRBV4S1A1TA0A5B7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms