Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.27■□□□□ 0.51
TRAV12-3A0A0B4J271 AP004609.3-201ENST00000610705 1884 ntBASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV12-3A0A0B4J271 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV12-3A0A0B4J271 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-3A0A0B4J271 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-3A0A0B4J271 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-3A0A0B4J271 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-3A0A0B4J271 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-3A0A0B4J271 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV12-3A0A0B4J271 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV12-3A0A0B4J271 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV12-3A0A0B4J271 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-3A0A0B4J271 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-3A0A0B4J271 WHAMMP3-201ENST00000611636 1609 ntBASIC18.23■□□□□ 0.51
TRAV12-3A0A0B4J271 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-3A0A0B4J271 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAV12-3A0A0B4J271 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-3A0A0B4J271 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAV12-3A0A0B4J271 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L13-201ENST00000554103 1267 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L15-201ENST00000611059 1267 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L23-201ENST00000615195 1269 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L24-201ENST00000617576 1269 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L22-201ENST00000618238 1269 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L20-201ENST00000619712 1269 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L21-201ENST00000622058 1269 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L10-201ENST00000622460 1267 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 DUX4L25-201ENST00000624915 1269 ntBASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-3A0A0B4J271 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV12-3A0A0B4J271 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRAV12-3A0A0B4J271 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV12-3A0A0B4J271 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV12-3A0A0B4J271 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAV12-3A0A0B4J271 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 DUX4L11-201ENST00000611504 1267 ntBASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 DUX4L12-201ENST00000614593 1267 ntBASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 DUX4L14-201ENST00000621227 1267 ntBASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-3A0A0B4J271 AC091060.1-201ENST00000623524 1766 ntBASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 ZNRF2P2-203ENST00000454624 420 ntBASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV12-3A0A0B4J271 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-3A0A0B4J271 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV12-3A0A0B4J271 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-3A0A0B4J271 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-3A0A0B4J271 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRAV12-3A0A0B4J271 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-3A0A0B4J271 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV12-3A0A0B4J271 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-3A0A0B4J271 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV12-3A0A0B4J271 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-3A0A0B4J271 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV12-3A0A0B4J271 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV12-3A0A0B4J271 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV12-3A0A0B4J271 AC142472.1-201ENST00000612013 1741 ntBASIC18.15■□□□□ 0.5
TRAV12-3A0A0B4J271 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV12-3A0A0B4J271 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV12-3A0A0B4J271 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV12-3A0A0B4J271 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-3A0A0B4J271 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
TRAV12-3A0A0B4J271 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-3A0A0B4J271 AC008813.1-201ENST00000536597 885 ntBASIC18.14■□□□□ 0.49
TRAV12-3A0A0B4J271 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAV12-3A0A0B4J271 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV12-3A0A0B4J271 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV12-3A0A0B4J271 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV12-3A0A0B4J271 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV12-3A0A0B4J271 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms