Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 CRYGFP-201ENST00000418459 633 ntBASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 REXO1L10P-201ENST00000615707 1290 ntBASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 REXO1L12P-201ENST00000622156 912 ntBASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 CROCCP2-202ENST00000412962 2773 ntBASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPN6Q9Y6Q1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 KRT8P7-201ENST00000533003 1432 ntBASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 AC011676.5-201ENST00000624864 2660 ntBASIC19.18■□□□□ 0.66
CAPN6Q9Y6Q1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 NKILA-202ENST00000614771 2598 ntBASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AP003041.3-201ENST00000527151 707 ntBASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 CD99P1-205ENST00000527459 561 ntBASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 AL135905.2-201ENST00000584934 1404 ntBASIC19.17■□□□□ 0.66
CAPN6Q9Y6Q1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CAPN6Q9Y6Q1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms