Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.17■□□□□ 0.34
GPC6Q9Y625 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 C2orf69P3-201ENST00000565542 1120 ntBASIC17.17■□□□□ 0.34
GPC6Q9Y625 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 MMP23A-201ENST00000234610 1017 ntBASIC17.16■□□□□ 0.34
GPC6Q9Y625 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GPC6Q9Y625 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC6Q9Y625 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 AC034236.2-201ENST00000606662 1610 ntBASIC17.15■□□□□ 0.34
GPC6Q9Y625 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 AL390955.1-201ENST00000428694 934 ntBASIC17.15■□□□□ 0.34
GPC6Q9Y625 SLC25A1P2-201ENST00000430693 912 ntBASIC17.15■□□□□ 0.34
GPC6Q9Y625 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 TSPY15P-201ENST00000457163 923 ntBASIC17.15■□□□□ 0.34
GPC6Q9Y625 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 BX088651.1-201ENST00000540551 451 ntBASIC17.15■□□□□ 0.34
GPC6Q9Y625 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC6Q9Y625 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
GPC6Q9Y625 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms