Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.77■□□□□ 0.91
R3HCC1Q9Y3T6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
R3HCC1Q9Y3T6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.77■□□□□ 0.91
R3HCC1Q9Y3T6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
R3HCC1Q9Y3T6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.77■□□□□ 0.91
R3HCC1Q9Y3T6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 AC116562.2-201ENST00000507042 360 ntBASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 REXO1L10P-201ENST00000615707 1290 ntBASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 REXO1L12P-201ENST00000622156 912 ntBASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 AC104417.2-201ENST00000562989 1793 ntBASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 RCC2P6-201ENST00000526625 1557 ntBASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HCC1Q9Y3T6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 B3GAT3P1-201ENST00000471720 806 ntBASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HCC1Q9Y3T6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 FAM207BP-201ENST00000447172 505 ntBASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 PCDH8P1-201ENST00000428983 2773 ntBASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 UBALD1-205ENST00000590891 2641 ntBASIC20.74■□□□□ 0.91
R3HCC1Q9Y3T6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms