Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 PRYP5-201ENST00000451909 266 ntBASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
RTCBQ9Y3I0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 AC004817.3-201ENST00000602957 2129 ntBASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 AC136632.2-201ENST00000512891 861 ntBASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCBQ9Y3I0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 YBX1P5-201ENST00000509441 847 ntBASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
RTCBQ9Y3I0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 SNHG9-202ENST00000564014 471 ntBASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RTCBQ9Y3I0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTCBQ9Y3I0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms