Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 B3GAT3P1-201ENST00000471720 806 ntBASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 MIR6786-201ENST00000616843 113 ntBASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 AL355802.2-201ENST00000402069 882 ntBASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 AC011506.1-201ENST00000474329 610 ntBASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 RN7SL471P-201ENST00000580476 299 ntBASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 MIR3180-5-201ENST00000583743 153 ntBASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D4Q9Y2X8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AP000692.2-201ENST00000608391 879 ntBASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms