Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCML2Q9UQR0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
SCML2Q9UQR0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.81■□□□□ 0.6
SCML2Q9UQR0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 AC022898.2-201ENST00000616822 1312 ntBASIC18.8■□□□□ 0.6
SCML2Q9UQR0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 KRT16P4-201ENST00000453883 522 ntBASIC18.8■□□□□ 0.6
SCML2Q9UQR0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 AC125634.1-201ENST00000438758 1403 ntBASIC18.8■□□□□ 0.6
SCML2Q9UQR0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 AC104581.1-202ENST00000635932 2618 ntBASIC18.8■□□□□ 0.6
SCML2Q9UQR0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCML2Q9UQR0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 UNC93B7-201ENST00000509439 705 ntBASIC18.79■□□□□ 0.6
SCML2Q9UQR0 AC111152.3-201ENST00000569699 673 ntBASIC18.79■□□□□ 0.6
SCML2Q9UQR0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 AL691432.3-201ENST00000621860 400 ntBASIC18.79■□□□□ 0.6
SCML2Q9UQR0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCML2Q9UQR0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 AC009533.2-201ENST00000543664 586 ntBASIC18.78■□□□□ 0.6
SCML2Q9UQR0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCML2Q9UQR0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCML2Q9UQR0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCML2Q9UQR0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.77■□□□□ 0.6
SCML2Q9UQR0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms