Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 KRT8P50-201ENST00000562022 1438 ntBASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 IGHV3-47-201ENST00000425060 335 ntBASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 GUSBP12-201ENST00000513727 720 ntBASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 AL160237.2-201ENST00000556165 472 ntBASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 Z69720.1-201ENST00000601483 472 ntBASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 HEIH-201ENST00000623091 1652 ntBASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HDAC6Q9UBN7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 LTB4R2-202ENST00000528054 3092 ntBASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
HDAC6Q9UBN7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
HDAC6Q9UBN7 AL354751.1-201ENST00000412768 1863 ntBASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 AC009065.1-201ENST00000564055 1225 ntBASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 AL353692.3-201ENST00000407031 1396 ntBASIC20.45■□□□□ 0.86
HDAC6Q9UBN7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 FZD10-202ENST00000539839 3282 ntBASIC20.44■□□□□ 0.86
HDAC6Q9UBN7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms