Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PPARGC1AQ9UBK2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 KRT18P35-201ENST00000510488 1269 ntBASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 ZNF444P1-201ENST00000559497 298 ntBASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 AL121956.5-201ENST00000625261 221 ntBASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PPARGC1AQ9UBK2 AC068880.1-201ENST00000507289 2297 ntBASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 KRT89P-201ENST00000620027 1478 ntBASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 SPDYE13P-201ENST00000445314 798 ntBASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 AC008687.5-201ENST00000593746 558 ntBASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 AL445228.2-201ENST00000605589 952 ntBASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 AP000997.3-201ENST00000623333 2250 ntBASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 AL024508.2-201ENST00000607749 1894 ntBASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PPARGC1AQ9UBK2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPARGC1AQ9UBK2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PPARGC1AQ9UBK2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.85■□□□□ 0.61
PPARGC1AQ9UBK2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PPARGC1AQ9UBK2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms