Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 EMBP1-201ENST00000458200 901 ntBASIC16.61■□□□□ 0.25
LRFN1Q9P244 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LRFN1Q9P244 AL031598.1-201ENST00000561511 1773 ntBASIC16.61■□□□□ 0.25
LRFN1Q9P244 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN1Q9P244 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 NUS1P2-201ENST00000417358 873 ntBASIC16.6■□□□□ 0.25
LRFN1Q9P244 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 KRT16P4-201ENST00000453883 522 ntBASIC16.6■□□□□ 0.25
LRFN1Q9P244 AC068472.1-201ENST00000474589 881 ntBASIC16.6■□□□□ 0.25
LRFN1Q9P244 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 AL353801.3-201ENST00000609898 542 ntBASIC16.6■□□□□ 0.25
LRFN1Q9P244 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 AC009154.2-201ENST00000621177 724 ntBASIC16.6■□□□□ 0.25
LRFN1Q9P244 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN1Q9P244 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN1Q9P244 GMCL1P1-201ENST00000463439 1581 ntBASIC16.6■□□□□ 0.25
LRFN1Q9P244 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 POM121L3P-201ENST00000419331 1163 ntBASIC16.59■□□□□ 0.25
LRFN1Q9P244 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.59■□□□□ 0.25
LRFN1Q9P244 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN1Q9P244 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LRFN1Q9P244 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.58■□□□□ 0.25
LRFN1Q9P244 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.58■□□□□ 0.25
LRFN1Q9P244 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRFN1Q9P244 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRFN1Q9P244 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRFN1Q9P244 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
LRFN1Q9P244 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRFN1Q9P244 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN1Q9P244 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN1Q9P244 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN1Q9P244 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN1Q9P244 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms