Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 AK4P3-201ENST00000418260 669 ntBASIC18.48■□□□□ 0.55
UBP1Q9NZI7 PVRIG2P-201ENST00000435460 978 ntBASIC18.48■□□□□ 0.55
UBP1Q9NZI7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBP1Q9NZI7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 TSPY5P-201ENST00000426936 936 ntBASIC18.47■□□□□ 0.55
UBP1Q9NZI7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 KRT18P38-201ENST00000449496 1282 ntBASIC18.47■□□□□ 0.55
UBP1Q9NZI7 AL359075.1-203ENST00000462729 1002 ntBASIC18.47■□□□□ 0.55
UBP1Q9NZI7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBP1Q9NZI7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 RNF152P1-201ENST00000397754 604 ntBASIC18.46■□□□□ 0.55
UBP1Q9NZI7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 AC092597.1-201ENST00000487352 616 ntBASIC18.46■□□□□ 0.55
UBP1Q9NZI7 KRT18P21-201ENST00000515767 1272 ntBASIC18.46■□□□□ 0.55
UBP1Q9NZI7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 NOC2LP2-201ENST00000407594 1944 ntBASIC18.46■□□□□ 0.55
UBP1Q9NZI7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBP1Q9NZI7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UBP1Q9NZI7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UBP1Q9NZI7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBP1Q9NZI7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBP1Q9NZI7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBP1Q9NZI7 AL391807.1-203ENST00000604392 2365 ntBASIC18.45■□□□□ 0.54
UBP1Q9NZI7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms