Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.14■□□□□ 0.49
NSMCE4AQ9NXX6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 SNORA78-201ENST00000459373 127 ntBASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 AL355075.4-201ENST00000554988 638 ntBASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 NEK4P2-201ENST00000580004 1012 ntBASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NSMCE4AQ9NXX6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 SEC1P-202ENST00000473944 940 ntBASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 AC092865.7-201ENST00000641832 219 ntBASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 AC022898.2-201ENST00000616822 1312 ntBASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.12■□□□□ 0.49
NSMCE4AQ9NXX6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NSMCE4AQ9NXX6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms