Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPTLC3Q9NUV7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPTLC3Q9NUV7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 CROCCP2-202ENST00000412962 2773 ntBASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 AC106886.4-201ENST00000623557 2502 ntBASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPTLC3Q9NUV7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPTLC3Q9NUV7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 AC008040.2-201ENST00000461049 708 ntBASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 AC110285.5-201ENST00000611501 352 ntBASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC3Q9NUV7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 ESRRAP1-201ENST00000400596 1257 ntBASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 AC133681.1-201ENST00000465482 601 ntBASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 AL596257.1-201ENST00000641463 2694 ntBASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC3Q9NUV7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.94■□□□□ 0.78
SPTLC3Q9NUV7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms