Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 OR7E14P-202ENST00000530490 1290 ntBASIC20.21■□□□□ 0.83
VTA1Q9NP79 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 AC025062.2-201ENST00000605477 670 ntBASIC20.21■□□□□ 0.83
VTA1Q9NP79 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 AP000867.4-201ENST00000641616 219 ntBASIC20.21■□□□□ 0.83
VTA1Q9NP79 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.21■□□□□ 0.83
VTA1Q9NP79 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
VTA1Q9NP79 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTA1Q9NP79 HLA-J-201ENST00000462773 1622 ntBASIC20.2■□□□□ 0.82
VTA1Q9NP79 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.2■□□□□ 0.82
VTA1Q9NP79 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTA1Q9NP79 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTA1Q9NP79 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.2■□□□□ 0.82
VTA1Q9NP79 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
VTA1Q9NP79 POLD2P1-201ENST00000511220 997 ntBASIC20.2■□□□□ 0.82
VTA1Q9NP79 IGHV3-22-201ENST00000520721 359 ntBASIC20.2■□□□□ 0.82
VTA1Q9NP79 AC145285.3-201ENST00000564603 959 ntBASIC20.2■□□□□ 0.82
VTA1Q9NP79 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VTA1Q9NP79 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.2■□□□□ 0.82
VTA1Q9NP79 AL031598.1-201ENST00000561511 1773 ntBASIC20.2■□□□□ 0.82
VTA1Q9NP79 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.2■□□□□ 0.82
VTA1Q9NP79 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.2■□□□□ 0.82
VTA1Q9NP79 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VTA1Q9NP79 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTA1Q9NP79 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VTA1Q9NP79 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTA1Q9NP79 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.2■□□□□ 0.82
VTA1Q9NP79 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTA1Q9NP79 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTA1Q9NP79 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTA1Q9NP79 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VTA1Q9NP79 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 AC096633.1-201ENST00000422446 749 ntBASIC20.19■□□□□ 0.82
VTA1Q9NP79 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 TERC-201ENST00000602385 541 ntBASIC20.19■□□□□ 0.82
VTA1Q9NP79 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTA1Q9NP79 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTA1Q9NP79 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 PMS2P7-201ENST00000506558 1336 ntBASIC20.19■□□□□ 0.82
VTA1Q9NP79 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VTA1Q9NP79 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VTA1Q9NP79 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 NKAPP1-205ENST00000585790 367 ntBASIC20.18■□□□□ 0.82
VTA1Q9NP79 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 AC139530.3-201ENST00000620344 690 ntBASIC20.18■□□□□ 0.82
VTA1Q9NP79 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
VTA1Q9NP79 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTA1Q9NP79 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
VTA1Q9NP79 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.17■□□□□ 0.82
VTA1Q9NP79 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.17■□□□□ 0.82
VTA1Q9NP79 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
VTA1Q9NP79 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTA1Q9NP79 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms