Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.34■□□□□ 0.37
BRF2Q9HAW0 COX11P1-201ENST00000489116 835 ntBASIC17.34■□□□□ 0.37
BRF2Q9HAW0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 AC010203.1-204ENST00000548782 407 ntBASIC17.34■□□□□ 0.37
BRF2Q9HAW0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 AC006116.8-202ENST00000587620 1550 ntBASIC17.34■□□□□ 0.37
BRF2Q9HAW0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 AC022898.2-201ENST00000616822 1312 ntBASIC17.34■□□□□ 0.37
BRF2Q9HAW0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRF2Q9HAW0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRF2Q9HAW0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRF2Q9HAW0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
BRF2Q9HAW0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRF2Q9HAW0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BRF2Q9HAW0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRF2Q9HAW0 LINC00167-201ENST00000530583 1419 ntBASIC17.33■□□□□ 0.36
BRF2Q9HAW0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.33■□□□□ 0.36
BRF2Q9HAW0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 AC113347.1-201ENST00000413321 391 ntBASIC17.33■□□□□ 0.36
BRF2Q9HAW0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 RASA4DP-201ENST00000460726 1199 ntBASIC17.33■□□□□ 0.36
BRF2Q9HAW0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 AL023973.1-201ENST00000624619 620 ntBASIC17.33■□□□□ 0.36
BRF2Q9HAW0 AC133561.5-201ENST00000635547 218 ntBASIC17.33■□□□□ 0.36
BRF2Q9HAW0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.33■□□□□ 0.36
BRF2Q9HAW0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 AC005363.2-201ENST00000618631 242 ntBASIC17.32■□□□□ 0.36
BRF2Q9HAW0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRF2Q9HAW0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRF2Q9HAW0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms