Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
RNF41Q9H4P4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF41Q9H4P4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF41Q9H4P4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.34■■□□□ 1.01
RNF41Q9H4P4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF41Q9H4P4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF41Q9H4P4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF41Q9H4P4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 DRAXINP1-201ENST00000437611 948 ntBASIC21.33■■□□□ 1.01
RNF41Q9H4P4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 AP002414.4-201ENST00000589764 1148 ntBASIC21.33■■□□□ 1.01
RNF41Q9H4P4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF41Q9H4P4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF41Q9H4P4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF41Q9H4P4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF41Q9H4P4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF41Q9H4P4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF41Q9H4P4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF41Q9H4P4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.32■■□□□ 1
RNF41Q9H4P4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
RNF41Q9H4P4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RNF41Q9H4P4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.32■■□□□ 1
RNF41Q9H4P4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.32■■□□□ 1
RNF41Q9H4P4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF41Q9H4P4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.32■■□□□ 1
RNF41Q9H4P4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF41Q9H4P4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF41Q9H4P4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
RNF41Q9H4P4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.32■■□□□ 1
RNF41Q9H4P4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 AL354751.1-201ENST00000412768 1863 ntBASIC21.31■■□□□ 1
RNF41Q9H4P4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 MTCL1P1-201ENST00000446207 792 ntBASIC21.31■■□□□ 1
RNF41Q9H4P4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.31■■□□□ 1
RNF41Q9H4P4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.31■■□□□ 1
RNF41Q9H4P4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.31■■□□□ 1
RNF41Q9H4P4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF41Q9H4P4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF41Q9H4P4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.31■■□□□ 1
RNF41Q9H4P4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF41Q9H4P4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.3■■□□□ 1
RNF41Q9H4P4 FLJ13224-201ENST00000313737 1514 ntBASIC21.3■■□□□ 1
RNF41Q9H4P4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF41Q9H4P4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF41Q9H4P4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF41Q9H4P4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF41Q9H4P4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.3■■□□□ 1
RNF41Q9H4P4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF41Q9H4P4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.3■■□□□ 1
RNF41Q9H4P4 AC246785.2-201ENST00000432512 513 ntBASIC21.3■■□□□ 1
RNF41Q9H4P4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.3■■□□□ 1
RNF41Q9H4P4 VENTXP7-201ENST00000475503 772 ntBASIC21.3■■□□□ 1
RNF41Q9H4P4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.3■■□□□ 1
RNF41Q9H4P4 TPSP2-201ENST00000561760 610 ntBASIC21.3■■□□□ 1
RNF41Q9H4P4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms