Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 AP000997.3-201ENST00000623333 2250 ntBASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC68Q9H2F9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 FAM87A-204ENST00000613235 858 ntBASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 REXO1L9P-201ENST00000604264 2108 ntBASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC68Q9H2F9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 NEK4P2-201ENST00000580004 1012 ntBASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 AC010240.3-201ENST00000607688 395 ntBASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC68Q9H2F9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 AC024243.1-201ENST00000609234 778 ntBASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 AC092865.7-201ENST00000641832 219 ntBASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC68Q9H2F9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC68Q9H2F9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms