Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.12■□□□□ 0.65
LHX5Q9H2C1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 AC022898.2-201ENST00000616822 1312 ntBASIC19.11■□□□□ 0.65
LHX5Q9H2C1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 GPR32P1-201ENST00000601788 811 ntBASIC19.11■□□□□ 0.65
LHX5Q9H2C1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LHX5Q9H2C1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 PCED1CP-201ENST00000419887 785 ntBASIC19.1■□□□□ 0.65
LHX5Q9H2C1 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LHX5Q9H2C1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 AL353692.3-201ENST00000407031 1396 ntBASIC19.09■□□□□ 0.65
LHX5Q9H2C1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 FAM86EP-206ENST00000510506 987 ntBASIC19.09■□□□□ 0.65
LHX5Q9H2C1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 AL136038.3-201ENST00000561909 1096 ntBASIC19.09■□□□□ 0.65
LHX5Q9H2C1 AC005332.3-201ENST00000589904 676 ntBASIC19.09■□□□□ 0.65
LHX5Q9H2C1 AL390719.2-201ENST00000606993 987 ntBASIC19.09■□□□□ 0.65
LHX5Q9H2C1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 AC009154.2-201ENST00000621177 724 ntBASIC19.09■□□□□ 0.65
LHX5Q9H2C1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LHX5Q9H2C1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.08■□□□□ 0.65
LHX5Q9H2C1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms