Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 AC112698.1-201ENST00000510299 916 ntBASIC18.73■□□□□ 0.59
RNF38Q9H0F5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 AC114341.1-201ENST00000618070 349 ntBASIC18.73■□□□□ 0.59
RNF38Q9H0F5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 AC125634.1-201ENST00000438758 1403 ntBASIC18.73■□□□□ 0.59
RNF38Q9H0F5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
RNF38Q9H0F5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 LETM1P2-201ENST00000597330 2178 ntBASIC18.72■□□□□ 0.59
RNF38Q9H0F5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 AC132008.2-207ENST00000454517 770 ntBASIC18.72■□□□□ 0.59
RNF38Q9H0F5 SAPCD2P3-201ENST00000455031 850 ntBASIC18.72■□□□□ 0.59
RNF38Q9H0F5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 AP002469.2-201ENST00000531724 424 ntBASIC18.72■□□□□ 0.59
RNF38Q9H0F5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 BX323043.1-201ENST00000641006 1765 ntBASIC18.72■□□□□ 0.59
RNF38Q9H0F5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF38Q9H0F5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF38Q9H0F5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF38Q9H0F5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms