Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 KRT18P35-201ENST00000510488 1269 ntBASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 AC005332.3-201ENST00000589904 676 ntBASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 FLJ13224-201ENST00000313737 1514 ntBASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 AC138028.4-201ENST00000564984 1845 ntBASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1EQ9GZS1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 HTR7P1-202ENST00000624664 4411 ntBASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1EQ9GZS1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 Z83836.1-201ENST00000624605 1642 ntBASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AL353692.3-201ENST00000407031 1396 ntBASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AC005332.1-201ENST00000577698 1310 ntBASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 FAM86EP-206ENST00000510506 987 ntBASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 RNF126P1-202ENST00000569893 925 ntBASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AL445228.2-201ENST00000605589 952 ntBASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 AL390719.2-201ENST00000606993 987 ntBASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1EQ9GZS1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms