Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 AC023511.2-201ENST00000618803 211 ntBASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 AP005117.1-201ENST00000584346 1413 ntBASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF407Q9C0G0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 POM121L3P-201ENST00000419331 1163 ntBASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AC112777.1-201ENST00000540175 1423 ntBASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AC132938.6-201ENST00000623828 1655 ntBASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AL022342.1-201ENST00000400363 863 ntBASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 FAM197Y8-203ENST00000450145 560 ntBASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 AC009154.2-201ENST00000621177 724 ntBASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 NEFHP1-201ENST00000412845 2629 ntBASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZNF407Q9C0G0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 AP000347.1-202ENST00000435868 847 ntBASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 AC018712.1-201ENST00000455767 687 ntBASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 LINC01711-201ENST00000598340 967 ntBASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 AC104581.1-202ENST00000635932 2618 ntBASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 AL031284.1-201ENST00000419297 478 ntBASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 AC068472.1-201ENST00000474589 881 ntBASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF407Q9C0G0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 MTCL1P1-201ENST00000446207 792 ntBASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 AC148477.8-201ENST00000624298 468 ntBASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF407Q9C0G0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms