Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC8Q9BY41 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC8Q9BY41 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HDAC8Q9BY41 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HDAC8Q9BY41 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HDAC8Q9BY41 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
HDAC8Q9BY41 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 AC093677.2-201ENST00000600169 1863 ntBASIC17.95■□□□□ 0.46
HDAC8Q9BY41 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.95■□□□□ 0.46
HDAC8Q9BY41 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AC009078.2-202ENST00000463353 338 ntBASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AC106795.1-205ENST00000512851 1056 ntBASIC17.94■□□□□ 0.46
HDAC8Q9BY41 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HDAC8Q9BY41 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 AL096828.2-201ENST00000567259 1965 ntBASIC17.93■□□□□ 0.46
HDAC8Q9BY41 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.93■□□□□ 0.46
HDAC8Q9BY41 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 RBM17P3-201ENST00000417687 1192 ntBASIC17.93■□□□□ 0.46
HDAC8Q9BY41 AC096633.1-201ENST00000422446 749 ntBASIC17.93■□□□□ 0.46
HDAC8Q9BY41 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 AL662844.1-201ENST00000546340 181 ntBASIC17.93■□□□□ 0.46
HDAC8Q9BY41 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
HDAC8Q9BY41 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms