Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 AL162430.1-201ENST00000480705 870 ntBASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 AC022517.1-201ENST00000592429 346 ntBASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 KRT8P32-201ENST00000512863 1461 ntBASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SSBP4Q9BWG4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSBP4Q9BWG4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 KRT8P41-201ENST00000533985 1514 ntBASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 AC026185.1-201ENST00000445748 174 ntBASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 MYC-209ENST00000641252 345 ntBASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 KRT8P45-201ENST00000414328 1447 ntBASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSBP4Q9BWG4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSBP4Q9BWG4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms