Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.02■□□□□ 0.15
VRK1Q99986 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.01■□□□□ 0.15
VRK1Q99986 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 AC036111.1-201ENST00000533973 1582 ntBASIC16.01■□□□□ 0.15
VRK1Q99986 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK1Q99986 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
VRK1Q99986 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK1Q99986 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VRK1Q99986 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VRK1Q99986 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK1Q99986 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.01■□□□□ 0.15
VRK1Q99986 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
VRK1Q99986 MYC-208ENST00000641036 567 ntBASIC16.01■□□□□ 0.15
VRK1Q99986 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
VRK1Q99986 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK1Q99986 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK1Q99986 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VRK1Q99986 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 AL023284.2-201ENST00000405850 579 ntBASIC16■□□□□ 0.15
VRK1Q99986 UPK3BP1-201ENST00000428678 509 ntBASIC16■□□□□ 0.15
VRK1Q99986 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16■□□□□ 0.15
VRK1Q99986 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16■□□□□ 0.15
VRK1Q99986 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16■□□□□ 0.15
VRK1Q99986 DBP-204ENST00000599385 709 ntTSL 3 BASIC16■□□□□ 0.15
VRK1Q99986 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VRK1Q99986 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16■□□□□ 0.15
VRK1Q99986 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16■□□□□ 0.15
VRK1Q99986 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16■□□□□ 0.15
VRK1Q99986 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
VRK1Q99986 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16■□□□□ 0.15
VRK1Q99986 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK1Q99986 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.99■□□□□ 0.15
VRK1Q99986 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
VRK1Q99986 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.99■□□□□ 0.15
VRK1Q99986 TEX21P-204ENST00000641479 1693 ntBASIC15.99■□□□□ 0.15
VRK1Q99986 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VRK1Q99986 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.99■□□□□ 0.15
VRK1Q99986 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VRK1Q99986 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 AC112907.2-201ENST00000448639 330 ntBASIC15.99■□□□□ 0.15
VRK1Q99986 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.99■□□□□ 0.15
VRK1Q99986 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.99■□□□□ 0.15
VRK1Q99986 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.99■□□□□ 0.15
VRK1Q99986 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 KRT8P3-201ENST00000519669 1449 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms