Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.84■□□□□ 0.29
TM9SF2Q99805 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 AC073592.3-201ENST00000625118 1834 ntBASIC16.84■□□□□ 0.29
TM9SF2Q99805 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 AC008764.6-201ENST00000595909 2069 ntBASIC16.84■□□□□ 0.29
TM9SF2Q99805 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM9SF2Q99805 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.83■□□□□ 0.28
TM9SF2Q99805 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 AC009947.2-201ENST00000444014 672 ntBASIC16.83■□□□□ 0.28
TM9SF2Q99805 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.83■□□□□ 0.28
TM9SF2Q99805 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 AL023973.1-201ENST00000624619 620 ntBASIC16.83■□□□□ 0.28
TM9SF2Q99805 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM9SF2Q99805 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 KRT8P3-201ENST00000519669 1449 ntBASIC16.82■□□□□ 0.28
TM9SF2Q99805 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 AC008622.2-201ENST00000617006 1229 ntBASIC16.82■□□□□ 0.28
TM9SF2Q99805 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TM9SF2Q99805 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM9SF2Q99805 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.81■□□□□ 0.28
TM9SF2Q99805 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TM9SF2Q99805 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms