Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS1Q99742 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS1Q99742 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 AL354751.1-201ENST00000412768 1863 ntBASIC16.5■□□□□ 0.23
NPAS1Q99742 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.5■□□□□ 0.23
NPAS1Q99742 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPAS1Q99742 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 AL096828.2-201ENST00000567259 1965 ntBASIC16.5■□□□□ 0.23
NPAS1Q99742 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPAS1Q99742 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.5■□□□□ 0.23
NPAS1Q99742 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 AC024563.2-201ENST00000603282 481 ntBASIC16.5■□□□□ 0.23
NPAS1Q99742 REXO1L9P-201ENST00000604264 2108 ntBASIC16.5■□□□□ 0.23
NPAS1Q99742 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS1Q99742 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
NPAS1Q99742 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAS1Q99742 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS1Q99742 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS1Q99742 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 AL645929.1-201ENST00000420084 975 ntBASIC16.49■□□□□ 0.23
NPAS1Q99742 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS1Q99742 AL136038.3-201ENST00000561909 1096 ntBASIC16.49■□□□□ 0.23
NPAS1Q99742 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.49■□□□□ 0.23
NPAS1Q99742 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS1Q99742 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NPAS1Q99742 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 AL121956.5-201ENST00000625261 221 ntBASIC16.49■□□□□ 0.23
NPAS1Q99742 AL358472.4-201ENST00000633140 710 ntBASIC16.49■□□□□ 0.23
NPAS1Q99742 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS1Q99742 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS1Q99742 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS1Q99742 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS1Q99742 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS1Q99742 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS1Q99742 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS1Q99742 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS1Q99742 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS1Q99742 AC012313.1-201ENST00000593393 3059 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms