Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.19■□□□□ 0.5
NDNQ99608 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NDNQ99608 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDNQ99608 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
NDNQ99608 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.18■□□□□ 0.5
NDNQ99608 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NDNQ99608 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.18■□□□□ 0.5
NDNQ99608 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.18■□□□□ 0.5
NDNQ99608 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NDNQ99608 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 AC009947.2-201ENST00000444014 672 ntBASIC18.18■□□□□ 0.5
NDNQ99608 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.18■□□□□ 0.5
NDNQ99608 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 AC066615.1-201ENST00000640911 628 ntBASIC18.18■□□□□ 0.5
NDNQ99608 LINC01126-201ENST00000623515 1646 ntBASIC18.18■□□□□ 0.5
NDNQ99608 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDNQ99608 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NDNQ99608 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.18■□□□□ 0.5
NDNQ99608 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.18■□□□□ 0.5
NDNQ99608 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NDNQ99608 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NDNQ99608 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NDNQ99608 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.17■□□□□ 0.5
NDNQ99608 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.17■□□□□ 0.5
NDNQ99608 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
NDNQ99608 AC104390.1-201ENST00000555663 520 ntBASIC18.17■□□□□ 0.5
NDNQ99608 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
NDNQ99608 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NDNQ99608 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.17■□□□□ 0.5
NDNQ99608 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.17■□□□□ 0.5
NDNQ99608 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDNQ99608 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NDNQ99608 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.16■□□□□ 0.5
NDNQ99608 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.16■□□□□ 0.5
NDNQ99608 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 AC024243.1-201ENST00000609234 778 ntBASIC18.16■□□□□ 0.5
NDNQ99608 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms