Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.77■□□□□ 0.6
CDK5RAP1Q96SZ6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK5RAP1Q96SZ6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CDK5RAP1Q96SZ6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CDK5RAP1Q96SZ6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDK5RAP1Q96SZ6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDK5RAP1Q96SZ6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 AC112698.1-201ENST00000510299 916 ntBASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 AC099336.1-202ENST00000602961 463 ntBASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDK5RAP1Q96SZ6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 AC026471.1-201ENST00000564629 3026 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 TSPY19P-201ENST00000418461 509 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 TSPY18P-201ENST00000441642 509 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 KRT16P4-201ENST00000453883 522 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 FOSL1P1-201ENST00000511041 816 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 AC091304.2-201ENST00000564639 760 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 AP005901.3-202ENST00000581653 237 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 AC012313.10-201ENST00000623509 926 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 AC132938.6-201ENST00000623828 1655 ntBASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP1Q96SZ6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 AC009533.2-201ENST00000543664 586 ntBASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP1Q96SZ6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 TPM4P1-201ENST00000436100 807 ntBASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms