Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 PHGDH-209ENST00000641074 1780 ntBASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 PCDHA1-201ENST00000378133 2726 ntBASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 AL355312.1-201ENST00000407115 2176 ntBASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB3IPQ96QF0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 AC073210.2-201ENST00000430369 194 ntBASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB3IPQ96QF0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms