Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CSMD1Q96PZ7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 AC105339.3-201ENST00000560043 636 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 CEND1P1-201ENST00000451006 455 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 OR8S1-201ENST00000310194 1080 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 AC073621.1-201ENST00000392730 636 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 MRPL20P1-201ENST00000400819 433 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 LAGE3P1-201ENST00000425356 484 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 MKNK2P1-201ENST00000437526 628 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 ABCD1P5-201ENST00000445663 754 ntBASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSMD1Q96PZ7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 AC097374.2-201ENST00000618617 1306 ntBASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 TSEN15P1-201ENST00000423257 515 ntBASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD1Q96PZ7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 AC093520.2-201ENST00000561830 333 ntBASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms