Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 ANO7L1-203ENST00000602586 1720 ntBASIC19.19■□□□□ 0.66
ZNF558Q96NG5 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.19■□□□□ 0.66
ZNF558Q96NG5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF558Q96NG5 AC116562.4-201ENST00000641316 2276 ntBASIC19.18■□□□□ 0.66
ZNF558Q96NG5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 PGAM5P1-201ENST00000518923 814 ntBASIC19.18■□□□□ 0.66
ZNF558Q96NG5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 Z83851.2-201ENST00000609564 659 ntBASIC19.18■□□□□ 0.66
ZNF558Q96NG5 AP000867.4-201ENST00000641616 219 ntBASIC19.18■□□□□ 0.66
ZNF558Q96NG5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ZNF558Q96NG5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC007967.3-201ENST00000434308 558 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AL591424.1-201ENST00000442569 1213 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 RNA5SP415-201ENST00000517246 115 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC105339.3-201ENST00000560043 636 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC034105.1-201ENST00000563488 319 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AL356488.2-201ENST00000602755 427 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC107918.4-202ENST00000641623 219 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AC097374.2-201ENST00000618617 1306 ntBASIC19.17■□□□□ 0.66
ZNF558Q96NG5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZNF558Q96NG5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 AC073130.3-201ENST00000624389 2278 ntBASIC19.16■□□□□ 0.66
ZNF558Q96NG5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF558Q96NG5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF558Q96NG5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms