Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 ALG1L5P-201ENST00000482043 771 ntBASIC15.32■□□□□ 0.04
SPG11Q96JI7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 MTDHP4-201ENST00000600287 670 ntBASIC15.32■□□□□ 0.04
SPG11Q96JI7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 AL024508.2-201ENST00000607749 1894 ntBASIC15.32■□□□□ 0.04
SPG11Q96JI7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 AC005829.1-201ENST00000570002 483 ntBASIC15.32■□□□□ 0.04
SPG11Q96JI7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.32■□□□□ 0.04
SPG11Q96JI7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 AP002414.3-201ENST00000589352 1468 ntBASIC15.31■□□□□ 0.04
SPG11Q96JI7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 AC136632.2-201ENST00000512891 861 ntBASIC15.31■□□□□ 0.04
SPG11Q96JI7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPG11Q96JI7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.31■□□□□ 0.04
SPG11Q96JI7 YBX1P5-201ENST00000509441 847 ntBASIC15.31■□□□□ 0.04
SPG11Q96JI7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.31■□□□□ 0.04
SPG11Q96JI7 AL096865.1-201ENST00000606796 927 ntBASIC15.31■□□□□ 0.04
SPG11Q96JI7 AC106028.4-201ENST00000614509 607 ntBASIC15.31■□□□□ 0.04
SPG11Q96JI7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 AC097374.2-201ENST00000618617 1306 ntBASIC15.3■□□□□ 0.04
SPG11Q96JI7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 SDHAP2-201ENST00000455183 2001 ntBASIC15.3■□□□□ 0.04
SPG11Q96JI7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 MIR770-201ENST00000390219 98 ntBASIC15.3■□□□□ 0.04
SPG11Q96JI7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SPG11Q96JI7 C20orf181-201ENST00000623918 480 ntBASIC15.3■□□□□ 0.04
SPG11Q96JI7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPG11Q96JI7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms