Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 SPDYE21P-201ENST00000413323 827 ntBASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 AC108073.2-201ENST00000464002 357 ntBASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 AL031432.2-201ENST00000566714 459 ntBASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 AL928711.1-201ENST00000570165 459 ntBASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 SIGLEC16-201ENST00000599858 1437 ntBASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM43Q96BQ3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 MIR4751-201ENST00000578027 74 ntBASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 AC004706.3-202ENST00000621574 984 ntBASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM43Q96BQ3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 AL139400.1-201ENST00000366220 510 ntBASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 ELK2BP-201ENST00000415014 1224 ntBASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 BCRP1-201ENST00000444246 691 ntBASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 AL589182.2-201ENST00000619332 1049 ntBASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 AL158211.5-201ENST00000623583 2518 ntBASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRIM43Q96BQ3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 AL032819.2-201ENST00000624543 2162 ntBASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM43Q96BQ3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms