Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HPS1Q92902 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.6■□□□□ 0.25
HPS1Q92902 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HPS1Q92902 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HPS1Q92902 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.6■□□□□ 0.25
HPS1Q92902 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.6■□□□□ 0.25
HPS1Q92902 AL355355.2-201ENST00000442321 338 ntBASIC16.6■□□□□ 0.25
HPS1Q92902 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS1Q92902 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.6■□□□□ 0.25
HPS1Q92902 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.6■□□□□ 0.25
HPS1Q92902 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HPS1Q92902 AC103702.1-201ENST00000548801 2630 ntBASIC16.6■□□□□ 0.25
HPS1Q92902 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS1Q92902 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS1Q92902 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HPS1Q92902 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HPS1Q92902 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HPS1Q92902 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.59■□□□□ 0.25
HPS1Q92902 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HPS1Q92902 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.59■□□□□ 0.25
HPS1Q92902 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HPS1Q92902 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HPS1Q92902 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS1Q92902 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS1Q92902 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HPS1Q92902 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HPS1Q92902 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
HPS1Q92902 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HPS1Q92902 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HPS1Q92902 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 AC087499.1-201ENST00000418141 1075 ntBASIC16.58■□□□□ 0.24
HPS1Q92902 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HPS1Q92902 STK33P1-201ENST00000423835 1218 ntBASIC16.58■□□□□ 0.24
HPS1Q92902 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HPS1Q92902 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 AL355075.4-201ENST00000554988 638 ntBASIC16.58■□□□□ 0.24
HPS1Q92902 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.58■□□□□ 0.24
HPS1Q92902 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HPS1Q92902 AC073195.1-201ENST00000607241 877 ntBASIC16.58■□□□□ 0.24
HPS1Q92902 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms