Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT9Q92600 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 AC093010.1-201ENST00000473625 1624 ntBASIC16.72■□□□□ 0.27
CNOT9Q92600 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT9Q92600 AP000523.1-201ENST00000398242 1049 ntBASIC16.72■□□□□ 0.27
CNOT9Q92600 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.72■□□□□ 0.27
CNOT9Q92600 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CNOT9Q92600 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT9Q92600 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.72■□□□□ 0.27
CNOT9Q92600 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CNOT9Q92600 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT9Q92600 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT9Q92600 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT9Q92600 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CNOT9Q92600 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT9Q92600 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CNOT9Q92600 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT9Q92600 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT9Q92600 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT9Q92600 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CNOT9Q92600 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CNOT9Q92600 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CNOT9Q92600 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.71■□□□□ 0.27
CNOT9Q92600 LIN28AP1-201ENST00000429574 405 ntBASIC16.71■□□□□ 0.27
CNOT9Q92600 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.71■□□□□ 0.27
CNOT9Q92600 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.71■□□□□ 0.27
CNOT9Q92600 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CNOT9Q92600 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.71■□□□□ 0.27
CNOT9Q92600 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CNOT9Q92600 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CNOT9Q92600 AC097493.4-201ENST00000641197 219 ntBASIC16.71■□□□□ 0.27
CNOT9Q92600 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CNOT9Q92600 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNOT9Q92600 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT9Q92600 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.71■□□□□ 0.27
CNOT9Q92600 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNOT9Q92600 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CNOT9Q92600 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNOT9Q92600 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.7■□□□□ 0.26
CNOT9Q92600 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.7■□□□□ 0.26
CNOT9Q92600 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.7■□□□□ 0.26
CNOT9Q92600 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.7■□□□□ 0.26
CNOT9Q92600 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 ATP5G1P1-201ENST00000448724 379 ntBASIC16.7■□□□□ 0.26
CNOT9Q92600 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.7■□□□□ 0.26
CNOT9Q92600 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.7■□□□□ 0.26
CNOT9Q92600 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CNOT9Q92600 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CNOT9Q92600 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.7■□□□□ 0.26
CNOT9Q92600 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNOT9Q92600 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CNOT9Q92600 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNOT9Q92600 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms