Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX1Q92499 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.31■□□□□ 0.68
DDX1Q92499 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
DDX1Q92499 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DDX1Q92499 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX1Q92499 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDX1Q92499 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
DDX1Q92499 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.3■□□□□ 0.68
DDX1Q92499 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX1Q92499 STARP1-201ENST00000397973 869 ntBASIC19.3■□□□□ 0.68
DDX1Q92499 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
DDX1Q92499 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX1Q92499 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.3■□□□□ 0.68
DDX1Q92499 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX1Q92499 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 AL391807.1-203ENST00000604392 2365 ntBASIC19.3■□□□□ 0.68
DDX1Q92499 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX1Q92499 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX1Q92499 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX1Q92499 KRT18P55-202ENST00000578578 1546 ntBASIC19.3■□□□□ 0.68
DDX1Q92499 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.29■□□□□ 0.68
DDX1Q92499 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DDX1Q92499 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX1Q92499 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
DDX1Q92499 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 HLA-F-220ENST00000434407 884 ntBASIC19.29■□□□□ 0.68
DDX1Q92499 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.29■□□□□ 0.68
DDX1Q92499 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.29■□□□□ 0.68
DDX1Q92499 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.29■□□□□ 0.68
DDX1Q92499 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.29■□□□□ 0.68
DDX1Q92499 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.29■□□□□ 0.68
DDX1Q92499 AC116407.4-201ENST00000623319 1061 ntBASIC19.29■□□□□ 0.68
DDX1Q92499 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
DDX1Q92499 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DDX1Q92499 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 AC026471.1-201ENST00000564629 3026 ntBASIC19.29■□□□□ 0.68
DDX1Q92499 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX1Q92499 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX1Q92499 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
DDX1Q92499 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DDX1Q92499 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX1Q92499 LETM1P2-201ENST00000597330 2178 ntBASIC19.28■□□□□ 0.68
DDX1Q92499 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX1Q92499 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 AL671277.2-201ENST00000458060 996 ntBASIC19.28■□□□□ 0.68
DDX1Q92499 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.28■□□□□ 0.68
DDX1Q92499 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.28■□□□□ 0.68
DDX1Q92499 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.28■□□□□ 0.68
DDX1Q92499 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX1Q92499 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX1Q92499 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX1Q92499 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 AC006116.8-202ENST00000587620 1550 ntBASIC19.27■□□□□ 0.68
DDX1Q92499 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DDX1Q92499 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms