Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC7.27□□□□□ -1.25
SYNE2Q8WXH0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SYNE2Q8WXH0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SYNE2Q8WXH0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 PMPCAP1-201ENST00000508114 1576 ntBASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC026954.1-201ENST00000429771 1293 ntBASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC069120.2-201ENST00000524091 540 ntBASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 C1orf229-201ENST00000623686 2258 ntBASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 RPL13AP19-201ENST00000434320 584 ntBASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AC093004.1-201ENST00000508850 424 ntBASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNE2Q8WXH0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 KRT18P66-201ENST00000452970 1269 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC004790.2-201ENST00000623588 572 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC027369.6-201ENST00000525520 931 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC093525.8-201ENST00000624099 1342 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms