Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 AC099398.1-201ENST00000567919 2776 ntBASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC44A1Q8WWI5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 AC132938.6-201ENST00000623828 1655 ntBASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 RPS2P55-201ENST00000397318 883 ntBASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 AC107956.1-201ENST00000494359 873 ntBASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC44A1Q8WWI5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 AC133963.1-201ENST00000504166 1679 ntBASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 AC100803.2-201ENST00000562459 1963 ntBASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 SLC25A1P2-201ENST00000430693 912 ntBASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 AC112497.1-201ENST00000624824 639 ntBASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 AL138688.1-201ENST00000624851 1594 ntBASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 AP001094.4-201ENST00000579008 2176 ntBASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC44A1Q8WWI5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
SLC44A1Q8WWI5 LINC00602-201ENST00000629776 2065 ntBASIC18.14■□□□□ 0.5
SLC44A1Q8WWI5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC44A1Q8WWI5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 AC012618.2-201ENST00000428058 849 ntBASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 TSPY17P-201ENST00000450329 467 ntBASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 AC098590.1-201ENST00000468126 897 ntBASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC44A1Q8WWI5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC44A1Q8WWI5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms