Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 REXO1L6P-202ENST00000619970 1078 ntBASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 AC009154.2-201ENST00000621177 724 ntBASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.77■□□□□ 0.59
SH3RF2Q8TEC5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH3RF2Q8TEC5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.77■□□□□ 0.59
SH3RF2Q8TEC5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SH3RF2Q8TEC5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 MIR5100-201ENST00000579544 119 ntBASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 AC005336.2-201ENST00000593183 939 ntBASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 AL591684.3-201ENST00000605187 298 ntBASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.76■□□□□ 0.59
SH3RF2Q8TEC5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 AF238378.1-201ENST00000526806 358 ntBASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 AC114341.1-201ENST00000618070 349 ntBASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SH3RF2Q8TEC5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 WIZP1-201ENST00000531444 2299 ntBASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 MTCL1P1-201ENST00000446207 792 ntBASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 SLC25A6P4-201ENST00000586535 553 ntBASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3RF2Q8TEC5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms