Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL023803.3-201ENST00000615559 522 ntBASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCHCR1Q8TD31 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 GPAT2P1-201ENST00000444924 1672 ntBASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 AC145285.6-201ENST00000604632 637 ntBASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 LINC01023-201ENST00000606054 436 ntBASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 AC010653.2-201ENST00000623505 997 ntBASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 PHGDH-209ENST00000641074 1780 ntBASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.9■□□□□ 0.62
CCHCR1Q8TD31 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.89■□□□□ 0.62
CCHCR1Q8TD31 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.89■□□□□ 0.62
CCHCR1Q8TD31 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCHCR1Q8TD31 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCHCR1Q8TD31 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCHCR1Q8TD31 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CCHCR1Q8TD31 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 AC211429.1-201ENST00000415277 523 ntBASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 AC092338.2-201ENST00000568827 1415 ntBASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCHCR1Q8TD31 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 AC007663.1-201ENST00000438948 1240 ntBASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 MIR3180-5-201ENST00000583743 153 ntBASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.88■□□□□ 0.61
CCHCR1Q8TD31 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms