Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 POM121L3P-201ENST00000419331 1163 ntBASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 AL024508.2-201ENST00000607749 1894 ntBASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 TSPY12P-201ENST00000421279 868 ntBASIC19■□□□□ 0.63
SHKBP1Q8TBC3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 AC008687.5-201ENST00000593746 558 ntBASIC19■□□□□ 0.63
SHKBP1Q8TBC3 ANKRD20A8P-203ENST00000641373 517 ntBASIC19■□□□□ 0.63
SHKBP1Q8TBC3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHKBP1Q8TBC3 AC112777.1-201ENST00000540175 1423 ntBASIC19■□□□□ 0.63
SHKBP1Q8TBC3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AL022342.1-201ENST00000400363 863 ntBASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AC079776.4-201ENST00000511039 504 ntBASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AL662844.1-201ENST00000546340 181 ntBASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 FZD10-202ENST00000539839 3282 ntBASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 LTB4R2-202ENST00000528054 3092 ntBASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHKBP1Q8TBC3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 AL499627.1-201ENST00000569373 2188 ntBASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 AC096582.2-201ENST00000510860 516 ntBASIC18.98■□□□□ 0.63
SHKBP1Q8TBC3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms