Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 HLA-F-220ENST00000434407 884 ntBASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 AL359075.1-203ENST00000462729 1002 ntBASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGCLL1Q8TB92 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 AC079602.3-201ENST00000623931 403 ntBASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HMGCLL1Q8TB92 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCLL1Q8TB92 PP12613-201ENST00000424958 2230 ntBASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 HBZP1-201ENST00000354915 429 ntBASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 AC112907.2-201ENST00000448639 330 ntBASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 AL136038.4-201ENST00000603606 1261 ntBASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 FLJ13224-201ENST00000313737 1514 ntBASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLL1Q8TB92 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLL1Q8TB92 AL391807.1-203ENST00000604392 2365 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms