Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 BCAR1-209ENST00000546196 1340 ntBASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AC132938.6-201ENST00000623828 1655 ntBASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AC005225.4-201ENST00000557330 545 ntBASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AC096734.2-201ENST00000562054 433 ntBASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 TK1-204ENST00000590430 683 ntTSL 3 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.02■■□□□ 1.44
COL22A1Q8NFW1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
COL22A1Q8NFW1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 AC015922.1-201ENST00000421102 1152 ntBASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 OR7E47P-204ENST00000575924 449 ntBASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
COL22A1Q8NFW1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 FAM86GP-201ENST00000448322 971 ntBASIC24■■□□□ 1.43
COL22A1Q8NFW1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24■■□□□ 1.43
COL22A1Q8NFW1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL22A1Q8NFW1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 AC004449.1-201ENST00000564240 433 ntBASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 MIR661-201ENST00000384842 89 ntBASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.99■■□□□ 1.43
COL22A1Q8NFW1 AC112907.3-201ENST00000577781 2400 ntBASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
COL22A1Q8NFW1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms