Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 KRT18P29-201ENST00000397031 1267 ntBASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 MESTP1-201ENST00000404287 994 ntBASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 AC096733.2-201ENST00000609937 1394 ntBASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
DNAAF1Q8NEP3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 AC124067.4-201ENST00000519691 2379 ntBASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 PP12613-201ENST00000424958 2230 ntBASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DNAAF1Q8NEP3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 FAM197Y1-201ENST00000421178 764 ntBASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 AC116562.2-201ENST00000507042 360 ntBASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 CD177P1-201ENST00000606252 935 ntBASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 AP001412.1-201ENST00000608405 714 ntBASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms