Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ZNF439Q8NDP4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF439Q8NDP4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 LINC01568-207ENST00000641790 1380 ntBASIC15.03■□□□□ -0
ZNF439Q8NDP4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 AC009947.2-201ENST00000444014 672 ntBASIC15.03■□□□□ -0
ZNF439Q8NDP4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 AL512604.3-201ENST00000569583 964 ntBASIC15.03■□□□□ -0
ZNF439Q8NDP4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF439Q8NDP4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.03■□□□□ -0
ZNF439Q8NDP4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 AC087499.1-201ENST00000418141 1075 ntBASIC15.02■□□□□ -0
ZNF439Q8NDP4 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.02■□□□□ -0
ZNF439Q8NDP4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 SEC1P-202ENST00000473944 940 ntBASIC15.02■□□□□ -0
ZNF439Q8NDP4 AC009065.1-201ENST00000564055 1225 ntBASIC15.02■□□□□ -0
ZNF439Q8NDP4 NEK4P2-201ENST00000580004 1012 ntBASIC15.02■□□□□ -0
ZNF439Q8NDP4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.02■□□□□ -0
ZNF439Q8NDP4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF439Q8NDP4 AC010240.3-201ENST00000607688 395 ntBASIC15.02■□□□□ -0
ZNF439Q8NDP4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF439Q8NDP4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms