Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.08■□□□□ 0
CCDC168Q8NDH2 AP000867.4-201ENST00000641616 219 ntBASIC15.08■□□□□ 0
CCDC168Q8NDH2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC168Q8NDH2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC168Q8NDH2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC168Q8NDH2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC168Q8NDH2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.08■□□□□ 0
CCDC168Q8NDH2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC168Q8NDH2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CCDC168Q8NDH2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC168Q8NDH2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 PGM5P2-202ENST00000637225 1043 ntBASIC15.07■□□□□ 0
CCDC168Q8NDH2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 MTCL1P1-201ENST00000446207 792 ntBASIC15.07■□□□□ 0
CCDC168Q8NDH2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 RNA5SP421-201ENST00000516864 134 ntBASIC15.07■□□□□ 0
CCDC168Q8NDH2 AC022145.2-201ENST00000598203 171 ntBASIC15.07■□□□□ 0
CCDC168Q8NDH2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 AC004835.2-201ENST00000603762 682 ntBASIC15.07■□□□□ 0
CCDC168Q8NDH2 AC005593.1-201ENST00000624894 515 ntBASIC15.07■□□□□ 0
CCDC168Q8NDH2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.07■□□□□ 0
CCDC168Q8NDH2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC168Q8NDH2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 MIR661-201ENST00000384842 89 ntBASIC15.06■□□□□ 0
CCDC168Q8NDH2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 AC079776.2-201ENST00000641154 1609 ntBASIC15.06■□□□□ 0
CCDC168Q8NDH2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 CRYGEP-201ENST00000412192 528 ntBASIC15.06■□□□□ 0
CCDC168Q8NDH2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CCDC168Q8NDH2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC168Q8NDH2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC168Q8NDH2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC168Q8NDH2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC168Q8NDH2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 PRYP5-201ENST00000451909 266 ntBASIC15.05■□□□□ 0
CCDC168Q8NDH2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 AC015911.4-201ENST00000588022 1070 ntBASIC15.05■□□□□ 0
CCDC168Q8NDH2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC168Q8NDH2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.05■□□□□ 0
CCDC168Q8NDH2 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.05■□□□□ -0
CCDC168Q8NDH2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC168Q8NDH2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC168Q8NDH2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC168Q8NDH2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC168Q8NDH2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC168Q8NDH2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.05■□□□□ -0
CCDC168Q8NDH2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.05■□□□□ -0
CCDC168Q8NDH2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.05■□□□□ -0
CCDC168Q8NDH2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC168Q8NDH2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms