Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDH20Q8N6Y1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 AC099343.3-201ENST00000605834 2503 ntBASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 NPAP1P7-201ENST00000613027 823 ntBASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 AC126763.1-201ENST00000552015 2118 ntBASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 AC073592.3-201ENST00000625118 1834 ntBASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH20Q8N6Y1 FZD10-202ENST00000539839 3282 ntBASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 LTB4R2-202ENST00000528054 3092 ntBASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 AL353692.3-201ENST00000407031 1396 ntBASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH20Q8N6Y1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 HCG4P8-203ENST00000443049 980 ntBASIC18.47■□□□□ 0.55
PCDH20Q8N6Y1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms