Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TMPOP1-202ENST00000424642 1267 ntBASIC17.74■□□□□ 0.43
CPSF7Q8N684 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.74■□□□□ 0.43
CPSF7Q8N684 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 AC141586.5-201ENST00000624546 2050 ntBASIC17.73■□□□□ 0.43
CPSF7Q8N684 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 AC091390.4-202ENST00000476426 537 ntBASIC17.73■□□□□ 0.43
CPSF7Q8N684 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 AC005363.2-201ENST00000618631 242 ntBASIC17.73■□□□□ 0.43
CPSF7Q8N684 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPSF7Q8N684 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CPSF7Q8N684 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 MIR564-202ENST00000385049 94 ntBASIC17.72■□□□□ 0.43
CPSF7Q8N684 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 DGCR10-201ENST00000609839 495 ntBASIC17.72■□□□□ 0.43
CPSF7Q8N684 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 KRT18P55-202ENST00000578578 1546 ntBASIC17.72■□□□□ 0.43
CPSF7Q8N684 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.72■□□□□ 0.43
CPSF7Q8N684 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPSF7Q8N684 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms