Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DEPDC4Q8N2C3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 KRT8P41-201ENST00000533985 1514 ntBASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 MMP23A-201ENST00000234610 1017 ntBASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 AC211429.1-201ENST00000415277 523 ntBASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 AL445675.2-201ENST00000620291 557 ntBASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
DEPDC4Q8N2C3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 KRT8P3-201ENST00000519669 1449 ntBASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 FSCN1P1-201ENST00000568912 1481 ntBASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 MYLKP1-201ENST00000509077 1580 ntBASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.87■□□□□ 0.29
DEPDC4Q8N2C3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms